From elixir-ita_ml.elixir-ita.cnr.it a srv00.area.ba.cnr.it Fri May 2 09:18:43 2025 From: elixir-ita_ml.elixir-ita.cnr.it a srv00.area.ba.cnr.it (General ELIXIR-Italy Mailing list) Date: Fri, 2 May 2025 09:18:43 +0200 Subject: [ELIXIR-ITA_ml] call for contribution to the Special Issue on Advancing Precision Medicine (IEEE Journal of Biomedical and Health Information). DEADLINE EXTENDED: 30 MAY 2025 In-Reply-To: References: Message-ID: *Avviso con preghiera di diffusione*: *Special Issue on Advancing Precision Medicine: Multi-Disciplinary Research and Emerging Strategies in Biomedical Informatics (IEEE Journal of Biomedical and Health Informatics) * Si rende noto agli interessati che *è stata posposta al 30 maggio 2025* * la scadenza per inviare articoli *relativi alla special issue di IEEE Journal of Biomedical and Health Information dedicata alla presentazione di nuovi approcci, metodologie e tools per migliorare l'interpretazione e l'applicazione di dati clinici e biologici. Tale special issue raccoglie anche contributi presentati nella conferenza BBCC2024. e tutte le informazioni sono disponibili al seguente indirizzo: https://www.embs.org/jbhi/wp-content/uploads/sites/18/2025/01/JBHI_AdvancingPrecisionMedicine_BBCC2024_final-2.pdf To whom it may concern, with request to spread the information. *Special Issue on Advancing Precision Medicine: Multi-Disciplinary Research and Emerging Strategies in Biomedical Informatics (IEEE Journal of Biomedical and Health Informatics): DEADLINE POSTPONED TO 30TH MAY 2025* We inform that it is still possible to submit articles related to the special issue of IEEE Journal of Biomedical and Health Information devoted to the presentation of new approaches, methodologies, and tools for improving the interpretation and application of clinical and biological data. This special issue also brings together contributions presented in the BBCC2024 conference. The new deadline is *May 30, 2025,* and all information is available at: *https://www.embs.org/jbhi/wp-content/uploads/sites/18/2025/01/JBHI_AdvancingPrecisionMedicine_BBCC2024_final-2.pdf * _______________________________________________________________ Anna Marabotti, Ph.D. Associate Professor Department of Chemistry and Biology "A. Zambelli" University of Salerno Phone: +39 089 969583 E-mail: amarabotti a unisa.it Institutional Web site: https://docenti.unisa.it/025916/home Deputy Training Platform Coordinator for ELIXIR-IT ( https://elixir-iib-training.github.io/site/) Member of the Board of the SIB Education Group ( https://sib-biochemistry.it/about-us/sib-group/education/) Associate Editor for the Special Issue: "Advancing Precision Medicine: Multi-Disciplinary Research and Emerging Strategies in Biomedical Informatics" (see here the call ) -------------- parte successiva -------------- Un allegato HTML è stato rimosso... URL: From elixir-ita_ml.elixir-ita.cnr.it a srv00.area.ba.cnr.it Thu May 8 10:24:16 2025 From: elixir-ita_ml.elixir-ita.cnr.it a srv00.area.ba.cnr.it (General ELIXIR-Italy Mailing list) Date: Thu, 8 May 2025 10:24:16 +0200 Subject: [ELIXIR-ITA_ml] PhD School on Modern Bioinformatics towards Pangenomics - Ischia, Italy Message-ID: <6fzoodnrurd6v3db3o4ev77njyfhmz6btkufbpsng6ntsdv5ps@x2x3s2x3xzxc> PhD School on Modern Bioinformatics towards Pangenomics - Ischia, Italy We are happy to announce the "PhD School on Modern Bioinformatics towards Pangenomics" to be held in Ischia, Italy, July 8 -- July 14, 2025. The school is for young researchers interested in broad topics of Bioinformatics, with a focus on Pangenomics and modern advances in sequencing and data analysis. The topics of the school are: Introduction to Bioinformatics Services in Pangenomics and Cancer Genomics. Introduction to modern genome sequence technologies, data analysis and software tools in genome structural variations Structural variations in diseases, mapping copy number variation by genome sequencing Latest trend methods and experimental validation Research challenges The confirmed speakers are: Vincenza Colonna University of Tennessee Health Science Center, Memphis, TN, US Integrating Genetic Ancestry, Environmental Exposure and Health Equity Erik Garrison University of Tennessee Health Science Center, Memphis, TN, US Arun Isaac University College London, London, UK Reproducible research Benedict Paten University of California, Santa Cruz, CA, US Pjotr Prins University of Tennessee Health Science Center, Memphis, TN, US Genetics in the age of pangenomics Tobias Rausch European Molecular Biology Laboratory (EMBL), Heidelberg, DE Introduction to cancer genomics and its caveats Mutational processes and structural & copy-number variation analysis The benefits of interrogating (cancer) genomes using long reads SV analysis using short-reads Mauricio Soto Gomez University of Milano, Milano, IT Tomá? Szemes Geneton s.r.o. & Comenius University in Bratislava, Slovakia The last three days (July 12 to July 14) are dedicated to the hackathon "From one genome to many". More details on the events is available at the website https://www.pangenome.eu/summer-school-2025 The school is open to 20 participants, to guarantee fruitful interactions among participants. To apply for participation, upload a 1-page CV to the registration site https://app.formbricks.com/s/cm9l760pp6q6zw201zm8tjh7g The deadline for applications is May 16, 2025 12:00?PM. The school and the hackathon are part of the activities of the Forgenom II, which is going to cover the expenses of the participants. The Forgenom II project has received funding from the Horizon Europe program under grant agreement No. 101160008. The school is a joint event with Pangaia --- Pangenome Graph Algorithms and Data Integration. The Pangaia project has received funding from the European Union?s Horizon 2020 Research and Innovation Staff Exchange programme under the Marie Sk?odowska-Curie grant agreement No. 872539 Please feel free to forward this message to your colleagues and students. For further questions please contact gianluca.dellavedova a unimib.it and simone.ciccolella a unimib.it Best regards, Gianluca Della Vedova From elixir-ita_ml.elixir-ita.cnr.it a srv00.area.ba.cnr.it Thu May 8 18:04:33 2025 From: elixir-ita_ml.elixir-ita.cnr.it a srv00.area.ba.cnr.it (General ELIXIR-Italy Mailing list) Date: Thu, 8 May 2025 18:04:33 +0200 Subject: [ELIXIR-ITA_ml] =?utf-8?q?Register_Now=3A_Course=3A_=E2=80=9CIntr?= =?utf-8?q?oduction_to_Nextflow=E2=80=9D=2C_Naples_10-11_June_2025?= Message-ID: Dear All, ELIXIR-IIB, in collaboration with BITS, is pleased to announce the two-days course ?Introduction to Nextflow?, taking place 10?11 June 2025 at the Faculty of Biotechnology, University of Naples ?Federico II?, Italy. The workshop is open to anyone who wants to learn about the Nextflow programming language and wants to be able to build their own Nextflow pipelines. The first day (Hello Nextflow) is dedicated to the basics of Nextflow; the second day (Advanced Nextflow) is for those who have attended the first day or who already have a good knowledge of Nextflow and can already build basic pipelines with it. Key Information Application Deadline: 6th June 2025. Priority will be given to BITS2025 registered participants that will apply by 26th May 2025. Participants will be notified immediately for acceptance to the course, while places last. Seats Available: Limited to 30 participants selected on a first-come - first-served basis. Fee: The course does not include a fee. How to Apply Apply via this form: Application Form For full details, visit our website: https://elixir-iib-training.github.io/site/2025-06-06-Introduction_Nextflow_BITS2025 For questions, contact us at: elixir.ita.training a gmail.com or contact directly the organizers Anna Marabotti (amarabotti a unisa.it) and Margherita Mutarelli (margherita.mutarelli a isasi.cnr.it) We look forward to your participation! Best regards, The Organisers Anna Marabotti, University of Salerno and ELIXIR-IT Training Platform, Italy Margherita Mutarelli, Istituto di Scienze Applicate e Sistemi Intelligenti ?Eduardo Caianiello? ISASI-CNR, Italy -- *ELIXIR-IT Training * https://elixir-iib-training.github.io/site/ *If you no longer wish to receive updates from the ELIXIR-IT Training Platform please reply to this email by simply putting "REMOVE" in the subject line* -------------- parte successiva -------------- Un allegato HTML è stato rimosso... URL: From elixir-ita_ml.elixir-ita.cnr.it a srv00.area.ba.cnr.it Tue May 27 08:00:00 2025 From: elixir-ita_ml.elixir-ita.cnr.it a srv00.area.ba.cnr.it (General ELIXIR-Italy Mailing list) Date: Tue, 27 May 2025 08:00:00 +0200 Subject: [ELIXIR-ITA_ml] =?utf-8?q?Course=3A_=E2=80=9CIntroduction_to_Next?= =?utf-8?q?flow=E2=80=9D=2C_Naples_10-11_June_2025=3A_STILL_PLACES_?= =?utf-8?q?AVAILABLE?= Message-ID: [image: Banner_CNR.png] Dear All, ELIXIR-IT, in collaboration with BITS, is pleased to announce the two-days course ?Introduction to Nextflow?, taking place 10?11 June 2025 at the Faculty of Biotechnology, University of Naples ?Federico II?, Italy. The workshop is open to anyone who wants to learn about the Nextflow programming language and wants to be able to build their own Nextflow pipelines. The first day (Hello Nextflow) is dedicated to the basics of Nextflow; the second day (Advanced Nextflow) is for those who have attended the first day or who already have a good knowledge of Nextflow and can already build basic pipelines with it. Key Information Application Deadline: 6th June 2025. Participants will be notified immediately for acceptance to the course, while places last. Seats Available: Limited to 30 participants selected on a first-come - first-served basis. Fee: The course does not include a fee. How to Apply Apply via this form: Application Form For full details, visit our website: https://elixir-iib-training.github.io/site/2025-06-06-Introduction_Nextflow_BITS2025 For questions, contact us at: elixir.ita.training a gmail.com or contact directly the organizers Anna Marabotti (amarabotti a unisa.it) and Margherita Mutarelli (margherita.mutarelli a isasi.cnr.it) We look forward to your participation! Best regards, The Organisers Anna Marabotti, University of Salerno and ELIXIR-IT Training Platform, Italy Margherita Mutarelli, Istituto di Scienze Applicate e Sistemi Intelligenti ?Eduardo Caianiello? ISASI-CNR, Italy -- *ELIXIR-IT Training * https://elixir-iib-training.github.io/site/ *If you no longer wish to receive updates from the ELIXIR-IT Training Platform please reply to this email by simply putting "REMOVE" in the subject line* -------------- parte successiva -------------- Un allegato HTML è stato rimosso... URL: -------------- parte successiva -------------- Un allegato non testuale è stato rimosso.... Nome: Banner_CNR.png Tipo: image/png Dimensione: 219558 bytes Descrizione: non disponibile URL: