From elixir-ita_ml.elixir-ita.cnr.it a srv00.area.ba.cnr.it Fri Apr 6 20:29:19 2018 From: elixir-ita_ml.elixir-ita.cnr.it a srv00.area.ba.cnr.it (General ELIXIR-Italy Mailing list) Date: Fri, 6 Apr 2018 19:29:19 +0100 Subject: [ELIXIR-ITA_ml] FEBS Advanced Course "The molecular basis of diseases" - Bologna, May 23-25 In-Reply-To: <1523037429546.43120@unibo.it> References: <1523037429546.43120@unibo.it> Message-ID: Segnaliamo il FEBS Advanced Course "The molecular basis of diseases: Can we infer phenotypes from protein variant analysis?" che si terrà a Bologna dal 23 al 25 Maggio prossimi. Per informazioni e iscrizione: https://genomeanalysis2018.febsevents.org/ La scadenza per la richiesta di partecipazione è fissata al 15 Aprile. _________________________________________________________________________________________________ FEBS 2018 Advanced Course The molecular basis of diseases: Can we infer phenotypes from protein variant analysis? Bologna (Italy), 23-25 May 2018 Info and registration: https://genomeanalysis2018.febsevents.org/ Application deadline: 15 April 2018 The workshop aims at presenting the state-of-the-art of computational methods for genome interpretation and collects expert scientists from both experimental biomedicine and computational biology. NGS techniques allow detection of the differences in genetic sequences and in gene expression that can be associated to different phenotypes, and statistical methods can estimate a significance level for each association. However, the exploitation of genetic association data requires elucidation of how variations affect the structure of macromolecules and their interaction patterns. Proteins, their stability and their relationships in interactomes will be the central topic. Furthermore, a particular regard will be given to the regulation at the transcriptional and translational levels, as derived from epigenomic and ribosome profiling data. The format of the workshop allows extensive interaction among students and lecturers and offers to young researchers the possibility of presenting their work at poster sessions and with short selected talks. Course Organizers: Pier Luigi Martelli - University of Bologna, IT Mauno Vihinen - Lund University, SE Invited Speakers Yana Bromberg - Rutgers University, New Jersey, USA Søren Brunak - University of Copenhagen, DK Emanuele Buratti - International Center for Genetic Engineering and Biotechnology, Trieste, IT Montserrat Corominas - University of Barcelona, ES Piero Fariselli - University of Padova, IT Laura Furlong - University Pompeu Fabra, Barcelona, ES Zoya Ignatova - University of Hamburg, DE Hannah McLaren - European Bioinformatics Institute, Hinxton, UK Marianne Rooman - Free University of Brussels, BE Alfonso Valencia - Barcelona Supercoputing Center, ES Mauno Vihinen - Lund University, SE Sessions May 23, 2018 - Sequencing different levels of complexity (genomes, transcriptomes, epigenomes, transcriptomes): perspectives and data analysis challenges May 24, 2018 - Inferring the effect of variations on protein structure, stability and interactions. May 25, 2018 - From sequences to phenotype: is it possible to dissect the complexity of the relationship? -------------- parte successiva -------------- Un allegato non testuale è stato rimosso.... Nome: FEBS2018announcement.pdf Tipo: application/pdf Dimensione: 136855 bytes Descrizione: non disponibile URL: From elixir-ita_ml.elixir-ita.cnr.it a srv00.area.ba.cnr.it Mon Apr 9 10:37:16 2018 From: elixir-ita_ml.elixir-ita.cnr.it a srv00.area.ba.cnr.it (General ELIXIR-Italy Mailing list) Date: Mon, 9 Apr 2018 10:37:16 +0200 Subject: [ELIXIR-ITA_ml] =?utf-8?q?Bando_borse_di_studio_=22Orio_Carlini?= =?utf-8?q?=22_da_svolgere_presso_enti_della_comunit=C3=A0_GARR?= Message-ID: <5056f133-48f7-1902-b3f7-2f9353533444@garr.it> Cari colleghi, sperando di fare cosa gradita vorrei portare alla vostra attenzione il bando per 10 borse di studio su tematiche ICT aperto dal GARR e che sarà aperto fino a fine mese: https://www.garr.it/it/ricerca-e-formazione/formazione/borse-di-studio/bandi-attivi/bando-01-17 Le borse di studio possono essere svolte presso la sede centrale GARR di Roma o, presso un ente parte della comunità GARR che sia interessato ad ospitare il borsista e fargli svolgere un progetto di ricerca su temi relativi a infrastrutture e servizi di rete e cloud, infrastrutture digitali e temi collegati. Questa seconda opzione potrebbe essere quella più interessante per sviluppare un progettto di ricerca specifico per Elixir. Le borse di studio sono aperte a giovani entro i 30 anni in possesso di laurea triennale o specialistica. Sono compatibili con l'iscrizione a un corso di laurea specialistica e con il dottorato (purchè senza borsa). Ulteriori informazioni nel bando. Siamo a disposizione per chiarimenti un saluto Federica Tanlongo -- Federica Tanlongo Communications and Public Relations GARR - The Italian Research and Education Network Via dei Tizii 6 - 00185 Roma www.garr.it Dir: +39 06 4962 2530 - Mob: +39 334 6533251 From elixir-ita_ml.elixir-ita.cnr.it a srv00.area.ba.cnr.it Tue Apr 10 16:23:49 2018 From: elixir-ita_ml.elixir-ita.cnr.it a srv00.area.ba.cnr.it (General ELIXIR-Italy Mailing list) Date: Tue, 10 Apr 2018 14:23:49 +0000 Subject: [ELIXIR-ITA_ml] NETTAB 2018: Call for Abstracts for oral communications Message-ID: NETTAB 2018 Building a FAIR Bioinformatics environment October 22-24, 2018, Genoa, Italy http://www.nettab.org/2018/ CALL FOR ABSTRACTS FOR ORAL COMMUNICATIONS NETTAB 2018 is organised in collaboration with ELIXIR Nodes of the UK and Italy as well as the Italian Society of Bioinformatics, BITS. The main focus will be on FAIR principles in bioinformatics, a challenging topic that we hope will attract many researchers from all over the world, including but not limited to, Bioinformaticians, Biologists, Computer Scientists, and others working or interested in the above research scope. The FAIR Guiding Principles for scientific data management and stewardship, published in 2016, has sparked worldwide interest across the biology community: from grassroots to policymakers, and from data providers to publishers. In order to make the FAIR concept a reality, we need to answer many questions, like: What is FAIRness? How to make FAIR data a reality? How to facilitate the translation to FAIR data? How to measure it? On these topics, there are many ongoing projects, such as EOSCpilot, FAIRmetrics, FAIRsharing, and GO-FAIR. Now is the perfect time to discuss on these topics and related actions, and to move on from FAIR principles to FAIR practice. The workshop will provide an excellent environment and a range of opportunities to present and discuss methods, theoretical approaches, algorithms, tools, platforms, practical applications and experiences of FAIR in Bioinformatics. TOPICS Methods, theoretical approaches, algorithms, tools, platforms, practical applications and experiences of FAIR in Bioinformatics including, but not limited to: FAIR concept * Specification and revision of components, conceptual issues. * Criticisms and review of FAIR principles Development tools * FAIR Web Services, metadata for FAIR tools, revision of standard formats. FAIRification methodologies * FAIRification best practices and training * Experiences of FAIR methods * Best practices and lessons learned from domains outside bioinformatics. * FAIRness evaluation * FAIRness validation and correction tools. * FAIR metrics: Levels of FAIRness, FAIRness scores, FAIRness minimal levels. * FAIR environment * Integration and interoperation of FAIR data and systems. * FAIR and its demonstrated contribution to open science and reproducible results * FAIR principles and practices of research outputs other than data: workflows, scripts, tools, models, training materials, SOPs etc * Surveys of FAIR resources and methods * FAIR value * Examples of FAIR in practice and the benefits of FAIR resources * Related initiatives to FAIR: for example Data Commons and EOSC * The economics of FAIR * Incentives for FAIR stewardship throughout the data lifecycle The topics of NETTAB 2018 also include the usual topics of NETTAB workshops. INSTRUCTIONS AND DEADLINES Submission of abstracts for oral communications: Sunday May 20, 2018 Notification: Monday June 18, 2018 Abstracts of maximum four A4 pages must be submitted through EasyChair at: https://easychair.org/conferences/?conf=nettab2018 . See full instructions at: http://www.igst.it/nettab/2018/submissions/instructions-for-authors/ . KEYNOTE SPEAKERS Michel DUMONTIER, MaastrichtUniversity, The Netherlands Frederik COPPENS, Gent University , Belgium Patricia PALAGI, SIB, Switzerland Christine DURINX, ELIXIR, Switzerland GUEST SPEAKERS Rob HOOFT, DTLS, The Netherlands Rafael JIMENEZ, ELIXIR, UK Marco ROOS, LUMC, The Netherlands Amnon SHABO, Siemens, Germany Tutorial/Hackathon programme under definition. WORKSHOPS ORGANIZORS Carole Goble, University of Manchester Paolo Romano, Ospedale Policlinico San Martino, Genoa Mauro Giacomini, University of Genoa SCIENTIFIC COMMITTEE The Scientific Committee is being defined. Many invitations are still pending. * Oya Deniz BEYAN, Fraunhofer FIT, Germany * Michael CRUSOE, Common Workflow Language, Lithuania * Michel DUMONTIER, Maastricht University, The Netherlands * Leyla Jael GARCIA CASTRO, EMBL-EBI, United Kingdom * Mauro GIACOMINI, University of Genoa, Italy * Carole GOBLE, University of Manchester, United Kingdom * Paul GROTH, Elsevier Labs * Paolo MANGHI, CNR/ISTI & OpenAIRE, Italy * Patricia PALAGI, Swiss Institute of Bioinformatics, Switzerland * Helen PARKINSON, EMBL-EBI, United Kingdom * Paolo ROMANO, Ospedale Policlinico San Martino, Italy * Mark WILKINSON, UPM, Spain * Katherine WOLSTENCROFT, Leiden University, The Netherlands Paolo Romano on behalf of Workshop Organizors Paolo Romano Ospedale Policlinico San Martino Genova, Italy Skype: p.romano Email: paolo.romano a hsanmartino.it - paolo.dm.romano a gmail.com -------------- parte successiva -------------- Un allegato HTML è stato rimosso... URL: